Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Protein Metabolic Process (GO:0019538) Genes Targeted by hsa-mir-1243 in CA Colon Graudens Cluster 41 Table contains all genes in the CA Colon Graudens cluster number 41. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1243 GO:0019538 3572 IL6ST interleukin 6 signal transducer (gp130, oncostatin M receptor) [Source:HGNC Symbol;Acc:6021] zzz999 Yes 64949 MRPS26 mitochondrial ribosomal protein S26 [Source:HGNC Symbol;Acc:14045] zzz999 10521 DDX17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:HGNC Symbol;Acc:2740] P T 55206 SBNO1 strawberry notch homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:22973] zzz999 7027 TFDP1 transcription factor Dp-1 [Source:HGNC Symbol;Acc:11749] zzz999 51329 ARL6IP4 ADP-ribosylation-like factor 6 interacting protein 4 [Source:HGNC Symbol;Acc:18076] zzz999 6129 RPL7 ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] zzz999 Yes 6128 RPL6 ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] zzz999 Yes 6152 RPL24 ribosomal protein L24 [Source:HGNC Symbol;Acc:10325] zzz999 Yes 29058 C20orf30 chromosome 20 open reading frame 30 [Source:HGNC Symbol;Acc:15876] T 6209 RPS15 ribosomal protein S15 [Source:HGNC Symbol;Acc:10388] zzz999 Yes 8667 EIF3H eukaryotic translation initiation factor 3, subunit H [Source:HGNC Symbol;Acc:3273] zzz999 Yes 10406 WFDC2 WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:15939] zzz999 Yes 9406 ZRANB2 zinc finger, RAN-binding domain containing 2 [Source:HGNC Symbol;Acc:13058] P T 3146 HMGB1 high mobility group box 1 [Source:HGNC Symbol;Acc:4983] zzz999 9572 NR1D1 nuclear receptor subfamily 1, group D, member 1 [Source:HGNC Symbol;Acc:7962] zzz999 91408 BTF3L4 basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] zzz999 219402 MTIF3 mitochondrial translational initiation factor 3 [Source:HGNC Symbol;Acc:29788] zzz999 Yes 80746 TSEN2 tRNA splicing endonuclease 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28422] zzz999 81669 CCNL2 cyclin L2 [Source:HGNC Symbol;Acc:20570] P T 6164 RPL34 ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] T Yes 81849 ST6GALNAC5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Source:HGNC Symbol;Acc:19342] zzz999 Yes 4736 RPL10A ribosomal protein L10a [Source:HGNC Symbol;Acc:10299] zzz999 Yes 51001 MTERFD1 MTERF domain containing 1 [Source:HGNC Symbol;Acc:24258] zzz999 54968 TMEM70 transmembrane protein 70 [Source:HGNC Symbol;Acc:26050] P 158293 FAM120AOS family with sequence similarity 120A opposite strand [Source:HGNC Symbol;Acc:23389] zzz999 526 ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 [Source:HGNC Symbol;Acc:854] T 6168 RPL37A ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] zzz999 Yes 6156 RPL30 ribosomal protein L30 [Source:HGNC Symbol;Acc:10333] zzz999 Yes 10399 GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 [Source:HGNC Symbol;Acc:4399] zzz999 6659 SOX4 SRY (sex determining region Y)-box 4 [Source:HGNC Symbol;Acc:11200] zzz999 6160 RPL31 ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] zzz999 Yes 689 BTF3 basic transcription factor 3 [Source:HGNC Symbol;Acc:1125] zzz999 95681 TSGA14 testis specific, 14 [Source:HGNC Symbol;Acc:12370] zzz999 51389 RWDD1 RWD domain containing 1 [Source:HGNC Symbol;Acc:20993] zzz999 84331 FAM195A family with sequence similarity 195, member A [Source:HGNC Symbol;Acc:14142] zzz999 10573 MRPL28 mitochondrial ribosomal protein L28 [Source:HGNC Symbol;Acc:14484] zzz999 Yes 6132 RPL8 ribosomal protein L8 [Source:HGNC Symbol;Acc:10368] zzz999 Yes 4173 MCM4 minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:6947] zzz999 7257 TSNAX translin-associated factor X [Source:HGNC Symbol;Acc:12380] zzz999 79033 ERI3 ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:17276] zzz999 51126 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:15908] zzz999 116985 ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:16925] zzz999 9045 RPL14 ribosomal protein L14 [Source:HGNC Symbol;Acc:10305] zzz999 Yes 10743 RAI1 retinoic acid induced 1 [Source:HGNC Symbol;Acc:9834] zzz999 6191 RPS4X ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] zzz999 Yes 827 CAPN6 calpain 6 [Source:HGNC Symbol;Acc:1483] zzz999 Yes 6229 RPS24 ribosomal protein S24 [Source:HGNC Symbol;Acc:10411] zzz999 Yes 10528 NOP56 NOP56 ribonucleoprotein homolog (yeast) [Source:HGNC Symbol;Acc:15911] zzz999 78992 YIPF2 Yip1 domain family, member 2 [Source:HGNC Symbol;Acc:28476] zzz999 26986 PABPC1 poly(A) binding protein, cytoplasmic 1 [Source:HGNC Symbol;Acc:8554] zzz999 Yes 79096 C11orf49 chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:28720] zzz999 51070 NOSIP nitric oxide synthase interacting protein [Source:HGNC Symbol;Acc:17946] zzz999 91748 C14orf43 chromosome 14 open reading frame 43 [Source:HGNC Symbol;Acc:19853] zzz999 57038 RARS2 arginyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:21406] zzz999 Yes 1844 DUSP2 dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:3068] zzz999 Yes 3646 EIF3E eukaryotic translation initiation factor 3, subunit E [Source:HGNC Symbol;Acc:3277] zzz999 Yes 3312 HSPA8 heat shock 70kDa protein 8 [Source:HGNC Symbol;Acc:5241] zzz999 Yes 81839 VANGL1 vang-like 1 (van gogh, Drosophila) [Source:HGNC Symbol;Acc:15512] T 974 CD79B CD79b molecule, immunoglobulin-associated beta [Source:HGNC Symbol;Acc:1699] zzz999 9024 BRSK2 BR serine/threonine kinase 2 [Source:HGNC Symbol;Acc:11405] zzz999 Yes 207 AKT1 v-akt murine thymoma viral oncogene homolog 1 [Source:HGNC Symbol;Acc:391] T Yes 84335 AKT1S1 AKT1 substrate 1 (proline-rich) [Source:HGNC Symbol;Acc:28426] zzz999 Yes 1874 E2F4 E2F transcription factor 4, p107/p130-binding [Source:HGNC Symbol;Acc:3118] zzz999 5435 POLR2F polymerase (RNA) II (DNA directed) polypeptide F [Source:HGNC Symbol;Acc:9193] zzz999 2224 FDPS farnesyl diphosphate synthase [Source:HGNC Symbol;Acc:3631] zzz999 5927 KDM5A lysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:9886] P T 6203 RPS9 ribosomal protein S9 [Source:HGNC Symbol;Acc:10442] zzz999 Yes 6201 RPS7 ribosomal protein S7 [Source:HGNC Symbol;Acc:10440] zzz999 Yes 11224 RPL35 ribosomal protein L35 [Source:HGNC Symbol;Acc:10344] zzz999 Yes 729515 C6orf35 chromosome 6 open reading frame 35 [Source:HGNC Symbol;Acc:17206] zzz999 6165 RPL35A ribosomal protein L35a [Source:HGNC Symbol;Acc:10345] zzz999 Yes 9467 SH3BP5 SH3-domain binding protein 5 (BTK-associated) [Source:HGNC Symbol;Acc:10827] zzz999 Yes 29941 PKN3 protein kinase N3 [Source:HGNC Symbol;Acc:17999] zzz999 Yes 6137 RPL13 ribosomal protein L13 [Source:HGNC Symbol;Acc:10303] zzz999 Yes 65005 MRPL9 mitochondrial ribosomal protein L9 [Source:HGNC Symbol;Acc:14277] T Yes 6122 RPL3 ribosomal protein L3 [Source:HGNC Symbol;Acc:10332] zzz999 Yes 51060 TXNDC12 thioredoxin domain containing 12 (endoplasmic reticulum) [Source:HGNC Symbol;Acc:24626] zzz999

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